Browse of TCMCG072C32417 protein

CDS

Accession Number	TCMCG072C32417
gbkey	CDS
Protein Id	XP_021867219.1
Location	complement(join(168971..169566,174539..174895,175734..176817,177731..178026,179598..179676,179819..179906,180253..180382,183225..183492,183828..185192,186005..186223,189497..189743,190019..190078,190417..190740,190872..190968,192672..192751,192863..192940,193359..193442,193554..193641,193819..193905,193983..194104,194185..194261,194350..194373))
Gene	LOC110805906
GeneID	110805906
Organism	Spinacia oleracea

Protein

Length	1949aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA396054
db_source	XM_022011527.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X2 [Spinacia oleracea]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATATTTTCAGAATCGGAGGGCTTCAACAATTATCATGGTTCCAGTTTCTTCCAAATGAATCAGATGTAACCTCGTCTTTACCTGATAAAAGGGATGGTGCGGCATTTGAACTTCTCTCCTCACATCTTCAGCTGCAGAAGGATGGATTTCTCAGCACTTGGACTAACTCCTTTGTGGGTCCTTGGGATCCTTCTCAGGGAACTCATAACCCCGATGAGAAAATTAAGCTCTGGCTTTTTCTTCCTGGCCGCCATTCCTCCGTTTCTGAAACTGCTCAAGCTGCAGTATCTAGATTAAGAGTTGTTGCCTCTGGACTCTGGATTTCTCCCGGCGATTCCGAAGAGGTCACAACTGCTTTGTCACAGGCTCTGAAAAATCGGATTGAGAGAGCACTTATTGGTCTCTCGTACGTAAGATACGGTGATGTGTTTTCAAGATATCGACCCTTTTCACAAAGTGAAGAACTCTTCAGGAAAGGACAACCGACTATTGAATTTGTCTTTGCTGCTAGTGAAGATGCCATCTTTGTGCACGCTATATTATCAGCGAAGCATGTACGCACGCTTTCTGGTGGTGATATGGAGAAAGTGTTGAAGTTATCCTCAAGTAGCCTTGGCCAGAGACTTCCTGAACATTTTGATATGGCAGTCATAGTCTCACCACATGGAATGCGTGGCAAGGTTACTGGGTGCTGTCCAAGTGATCTCGTGAAGCAGGTGTTTGTCGGTCCTGGCACTTCAAGAACTTCAACTGGATTAGTTGGTTTACCAAATCCTGTTGCTCACACATCTGGTGGCAAGTTGCGGGGGCAGAATTACTACTTAGAAGTTACCCTTGGCTGCAGTACTTCTGGAAGTGATAAGGTGAATCTGCATACTTCAAACACCAACAAGTCCAATCAACCAACATCTGGATCTCCCTCTTCTGTGAAAGGCAACCAGAAAGTATCAACAGGCGATGCTTCTTTTTGTGAAAAAACTTTCATCTATCCCTCTGAGGCGGTTCTTGTTCCAGTTTTACAAACCTCTTATGCAAGATCTTCTTTAAAAAGGTTTTGGCTACCAAATTGGACTGGGCTGTCGTTGGCTGGTTCTACTCTCTTAACAAATTGTTGTGGTTCTGAGACAGATGACTTGGATGATTCTTGGTATGAATCTGACGGGAATAGCTTGCAGCATGGTTTAAACAGTAGCAGCAACAGCAATAATAGTAGCATCAGCAGCATAAGTAACAGCTCAAGTGATAGTGACTGTAGAGCTAAGGCAACGTCCGGTGACCTTGAAGGTGATGCTGATTCATTAACTGGTAGACAGTCAGGCCTATCTTCTGTCCCCATGGAGACAAATGGCCTGAAACAGGGTTCAAAACGATCTCGCACTGGAGCAGATAGTGTGGTAAATGCTCCTACACAAGATTACAGCAATTCAGGCATCACGGGAGTTACAAACGATCAAATTGGATCTGAGTGGGAGTGGGATGATGATGAAAGAGGTGGGGGCATGGATATACAAGCACTTCTCTCTGAGTTTGGTGATTTTGGTGACTTCTTTGAAAATGATGCCTTGCCATTTGGAGAGCCCCCAGGAACTGCAGAGTCTCAGACACTTGTGTTTTCTGGGCAAGATTGTGGAGATGGGGGTGGCAGTCCCTCGGGTACCCTAATGGATATTCAGGATGCGATGCTTTTACCTGCAGGTTTCCAGATGTTTGAAAGTTTTCATTCACCCGCAACAGGCATGGAGGAGTGTATTAGTACTGACCAAGATGCCACTAAATGTACTTCGTCTGGTCTTGTGAACTTTGTACCAGCAGTTTCAAGTGGTGAAGTTGACCATGTAATAAAAGCTGAAGCATTGTTGACTGTTGCCCCTGAATATGGAGCAGTTGAGGCCCCTTCAAGTGAGCTCTCCTCAACTGTCTTTAGAAGTCCATATCAACCAAAATCTCAGAAAGCTGAGAGTTTGAATTCAAGTGGGAGTAATTATATTTATGGGGCAACGCCACCTTCATCCCCTGGCACTAATGCATGTGAAGAAAATACTTGCTTGACTGCTGACTCTAGAATACATCCTGGGAAACACAATATTGGTTCTGTTCTCCAAAAATTTTACACTCAGATAGAGAGAGGTCAAACTCCAATTGATACGAAGTCTTTTAAGCATAACAATAAAGTAATTTCATCTGAAGGGGCATCATTGTCTCTGTATTCTGGGTTCAACTCTGCTAGTTCTGCTAAATCCGTTCAAAATATGATAACTGAAGTTGCTAAAAGTGCCAAGCACCTCCTTCTATCTCAACAAACAGTCCCTTCCGTCGAACTTGAGTGCCTTATGTTCCAGGCTTTTCTGTGCAGGATAAGACATACATTATTGTCATTTTGTAACCCTGCTTCTACTGCCTGGAAAAGATCAATAGGGAACATAGGGATGGGACAACTTCCTGGTGATCCAAGCAGCACACTAGAAAATTTTCCTTGTAAATCTGAACTGAGGAAGAAGGAATCCATACCAGTTAGAATCGCTGGTGATTTTGATGGGGGGATGCTGGATAGCCCGTTTGATGCACCCATGGGGGTTTGGCGCTCTGTTGGAACATCAAAACCTGCAAAGCCTGCTAATACACCTACTATTGAGGTTTTTCCTTCTTCATCTCAGCACAACTTTAGCGAGGAAACTATGATTTCATATCGAAAAAGACAGCCACTTCAAGATTTTCTTGATGCCATGCCATTGCTTGTCCAACAAGCTGCCTCTTTTGTCGATGTTGCATTTGATGGTGAATTTGTTGACGGGCCGTACAGCTGGCTTGCTTTACAAGAGCAGTGGAGGCGGGGATTTTGTTGCGGGCCACATATGGCTCATGCTGGTTGTGGTGGCGTTTTAGCGTCTTGCCATTCCTTTGATATTGCTGGCGTGGATCTGCTTGATCCTGTTTCAGCTGATGTTCAGGCATCATCAGTGATAAGTTTGCTGCAATCCGATGTCAAAACAGCATTGAAATCTGCTTTTTGTAACGCAGATGGTCCTTTATTTGTCACAGATTGGTGCAAAGGCCGATCTCATTCAGCAGATGCAGGAACTATGATTGAAGCATTATCTGCTGAGTCCACTTTAAGCGAATATAGGGATTCATCTAACACTACAGTAATATCTATGGGGTCCCCAGTAAGCCCGTCACAGTCCTCTGCTAGTATGCCATCTGGTTTGAGAGGAAGCAAAGTGGAGGATGCTTGTCAAAGAAGGTTAAGCCATGAGCTCCGCATGTCAGAGTCAGAGCTACAGTCTGGATTGCAGAGGAGGCCTTCCTTGTTTGTGATTCCATCTTCTTCTATCCTTGTTGGGTACCAAGATGATTGGCTTAAGACATCAGCAAGCACTTTACAACTATGGGAGAAGGTTCCACTTGAGCCATATGCTTTTCAAAAACACGTGTCTTATTATGTTGTCTGTCCAAATGTCAATCCCCTTACTTCGGGGGCTGCTGATTTTTTTCAAGAACTTGGAAGTGTTTACGAGACGTGCAAATTGGGGAGCCATTCACCGCACACTGTTGGAAATCAAATGGATGTAGATTCAGGGAAGTGTCCAACTTCTGGTTTCATTCTCCTCGATGTCCCTCGATCAATGAAGGTAGAAAGTACAACAGCTACTGGTATGGGATCAATAAGTGACTTTTATCATTCTTTATCAAGTGGTTGGGATCTTGCAAGCTATCTCAGTTCTCTTGCAAAGGTTCTGAAAACCTTACAACTTGGGTCGAGCTTGGCTGCAAATGCAAAAGAAGGAAATAGTTGTCCTTGTACTGTGATCTATGTCGTGTGCCCGTTTCCTGATCCGAATGCTGTTCTTAAGACCATTCTTGAATCTTCAGTTGCTGTTTCTTCAGTAATTTTCTCATCGGAGAATGGTAAGAGAGCTATGTTGTGCAGTCAGGTTGGGAAAGCATTAAGCCACGCAGCTGGTGTTGATGAAGCTTCCATATCTAATATTCCCGCGCTTTCTGGCTTTAGTATTCCGAGGATAGTTCTGCAAATTGTTCCCGTAGATGCCATTTTCCGAGTTACTAGTCCAAGTCTTAATGAACTTGTGTTGCTCAAGGAAATAGCTTTTACTGTTTACAACAAAGCTAGGCGTATATCACGAGGCTCCTCCAATGAATTCATCCAATCATCGACCTTTTCTGGTAGATCTTCATCCATGCTGGTGAACATGGCTAATCCGATTCCGGGTATGTGGAAAGACTGTGTTGGTTCTCGTTTCTCAGGTCCGTCCTTATCAAGAGAAGGGGAGCTTGATCCTGGTATGAGAGCTGGAAACTGGGATAATTCATGGCAAACTACAAGGGCCGGGGGGCTAAGTTGTGACCCAAACCGAAGTGGAGATTCTTTCTTTCAAGAGGAGGCTCATTACATGTTTGAACCACTTTTTATTTTGTCTGAACCGGGCTCTGTGGAGAATGGGGTATCCCCTATGCCCATTGGTGGTGTGGGTACAGATGATAGCAGTGGAGGATTTGTGCAGAGTTCAACGCTATGTGGGGATACAGGACCCAGCTCCCAACTTGATGGAACTGAAGGAGATGGCTATGGATCTGGCTTACAAAAATCGCCCCCAAGCCTGCATTGCTGCTATGGCTGGACTGAAGATTGGCGTTGGCTAGTGTGCATATGGACTGATTCAAGGGGAGAACTGCTGGACAATCACACGTTCCCTTTTGGTGGAATCAGTAGTAGACAAGATACAAAGGGCATGCAAAACCTCTTTGTCCAAGTTCTTCAACAAGGTTGCCAACTTCTGCAGGCCTGTACAGCTCCTGATAATGGTGCGGCAAGAGCAAGAGATTTTGTAATTACACGGATTGGGTGCTTTTACGAGCTAGAATGCCAAGAATGGCAAAAGGCACTCTATTCAATTGGTGGATCAGAAGTAAAGAAATGGCCATTGCAACTACGCCGAACTAGTCCAGACGGTATACCAACAAGCAGTAACGGAGCTTCCCTGCAACAGCAGGAAGTTGAGAGAAGCTTACCTTCTTCACCCAATCCATTGTATAATCTCCACTCAAAATCCTCTGGCTTTATGAAAGGAGGCTTAGGACAAACTACTATTAGAAAACAGCTTATTGGTGGGCCAGCAGTTGTTGATGGCTCAAGGGGATCCCTGCAGTGGGTTCAGAGCATTACCTTTGTTTCAGTATCTGTGGATCATTCTTTGCATCTTGTCTCTCAAGCTGATGTTTCTACAGGTAGCAGTCAAGGTAATGGCATCACGGGTTCATTGAATTACCTTGAAGGATTTACCCCTGTTAGGTCTCTCGGTTCTACACCAGCATCTTACATTTTGATCCCTTCTCCAAGCATGCATTTTCTCACTCCTTCCCCACTTCAACTCCCAACATGTCTTACCTCCGAATCTCCCCCTCTAGCTCATCTGCTTCACAGTAAAGGCTACGCGATTCCACTTTCAACAGGTTTTGTTGTTTCCAAAGCTGTTCCATCTCTTAAGAAAGTTGCCAATAATCTGAAAGGAGAATGGCCTTCAGTTATTTCAGTTAGTCTTGTTGATTTCTATGGTGGTTGTGGTGTTTCTACTGATAAAATGGGAAGAGCACTTCCTAAGCAGGCAGGAAGGGGTGTGGTTTCTGATGCCGAGTATGAGGTTGAGATTCATTCAATTCTCGAATCTGTTATGGCTGAACTACATGCCTTGTCATGGATGACTGTGAGCCCGGCATATTTGGAGAGACGTACTGCGTTACCCTTTCACTGTGACATGGTATTGAGACTCAGAAGGCTGCTGTATTTTGCTGAGAAGGAAATCTCGCATCAGCCAGAAAGGTAA

Protein:   MWTNIFRIGGLQQLSWFQFLPNESDVTSSLPDKRDGAAFELLSSHLQLQKDGFLSTWTNSFVGPWDPSQGTHNPDEKIKLWLFLPGRHSSVSETAQAAVSRLRVVASGLWISPGDSEEVTTALSQALKNRIERALIGLSYVRYGDVFSRYRPFSQSEELFRKGQPTIEFVFAASEDAIFVHAILSAKHVRTLSGGDMEKVLKLSSSSLGQRLPEHFDMAVIVSPHGMRGKVTGCCPSDLVKQVFVGPGTSRTSTGLVGLPNPVAHTSGGKLRGQNYYLEVTLGCSTSGSDKVNLHTSNTNKSNQPTSGSPSSVKGNQKVSTGDASFCEKTFIYPSEAVLVPVLQTSYARSSLKRFWLPNWTGLSLAGSTLLTNCCGSETDDLDDSWYESDGNSLQHGLNSSSNSNNSSISSISNSSSDSDCRAKATSGDLEGDADSLTGRQSGLSSVPMETNGLKQGSKRSRTGADSVVNAPTQDYSNSGITGVTNDQIGSEWEWDDDERGGGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQTLVFSGQDCGDGGGSPSGTLMDIQDAMLLPAGFQMFESFHSPATGMEECISTDQDATKCTSSGLVNFVPAVSSGEVDHVIKAEALLTVAPEYGAVEAPSSELSSTVFRSPYQPKSQKAESLNSSGSNYIYGATPPSSPGTNACEENTCLTADSRIHPGKHNIGSVLQKFYTQIERGQTPIDTKSFKHNNKVISSEGASLSLYSGFNSASSAKSVQNMITEVAKSAKHLLLSQQTVPSVELECLMFQAFLCRIRHTLLSFCNPASTAWKRSIGNIGMGQLPGDPSSTLENFPCKSELRKKESIPVRIAGDFDGGMLDSPFDAPMGVWRSVGTSKPAKPANTPTIEVFPSSSQHNFSEETMISYRKRQPLQDFLDAMPLLVQQAASFVDVAFDGEFVDGPYSWLALQEQWRRGFCCGPHMAHAGCGGVLASCHSFDIAGVDLLDPVSADVQASSVISLLQSDVKTALKSAFCNADGPLFVTDWCKGRSHSADAGTMIEALSAESTLSEYRDSSNTTVISMGSPVSPSQSSASMPSGLRGSKVEDACQRRLSHELRMSESELQSGLQRRPSLFVIPSSSILVGYQDDWLKTSASTLQLWEKVPLEPYAFQKHVSYYVVCPNVNPLTSGAADFFQELGSVYETCKLGSHSPHTVGNQMDVDSGKCPTSGFILLDVPRSMKVESTTATGMGSISDFYHSLSSGWDLASYLSSLAKVLKTLQLGSSLAANAKEGNSCPCTVIYVVCPFPDPNAVLKTILESSVAVSSVIFSSENGKRAMLCSQVGKALSHAAGVDEASISNIPALSGFSIPRIVLQIVPVDAIFRVTSPSLNELVLLKEIAFTVYNKARRISRGSSNEFIQSSTFSGRSSSMLVNMANPIPGMWKDCVGSRFSGPSLSREGELDPGMRAGNWDNSWQTTRAGGLSCDPNRSGDSFFQEEAHYMFEPLFILSEPGSVENGVSPMPIGGVGTDDSSGGFVQSSTLCGDTGPSSQLDGTEGDGYGSGLQKSPPSLHCCYGWTEDWRWLVCIWTDSRGELLDNHTFPFGGISSRQDTKGMQNLFVQVLQQGCQLLQACTAPDNGAARARDFVITRIGCFYELECQEWQKALYSIGGSEVKKWPLQLRRTSPDGIPTSSNGASLQQQEVERSLPSSPNPLYNLHSKSSGFMKGGLGQTTIRKQLIGGPAVVDGSRGSLQWVQSITFVSVSVDHSLHLVSQADVSTGSSQGNGITGSLNYLEGFTPVRSLGSTPASYILIPSPSMHFLTPSPLQLPTCLTSESPPLAHLLHSKGYAIPLSTGFVVSKAVPSLKKVANNLKGEWPSVISVSLVDFYGGCGVSTDKMGRALPKQAGRGVVSDAEYEVEIHSILESVMAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLYFAEKEISHQPER